Mutation screening and NGS in hemat. malignancy
Mutation screening and NGS in hematological malignancies
In this mutation screening and next generation sequencing (NGS) of hematological malignancies, a limited number of diagnostic samples are shared with the participants for screening mutations (3-6 samples) and determining pathogenic mutations by means of NGS (3-4 samples).
The diagnostic samples for screening mutations are for testing the rapid diagnostics for the presence of e.g. FLT3 internal tandem duplications (ITD), FLT3 tyrosine kinase domain (TKD) mutations and mutations in IDH1/IDH2 for targeted therapy in patients diagnosed with acute myeloid leukemia (AML). Other genetic abnormalities and/or hematological malignancies can be added at a later stage.
The samples for determining pathogenic mutations by means of NGS are for testing the detection of all pathogenic mutations in patients with various hematological malignancies.
In this mutation screening and next generation sequencing (NGS) of hematological malignancies, a limited number of diagnostic samples are shared with the participants for screening mutations (3-6 samples) and determining pathogenic mutations by means of NGS (3-4 samples).
The diagnostic samples for screening mutations are for testing the rapid diagnostics for the presence of e.g. FLT3 internal tandem duplications (ITD), FLT3 tyrosine kinase domain (TKD) mutations and mutations in IDH1/IDH2 for targeted therapy in patients diagnosed with acute myeloid leukemia (AML). Other genetic abnormalities and/or hematological malignancies can be added at a later stage.
The samples for determining pathogenic mutations by means of NGS are for testing the detection of all pathogenic mutations in patients with various hematological malignancies.
Contactperson
dr. P.J.M. Valk (Coördinator)Frequency
1 rounds of 8 samplesNumber of participants
22Price
Participation
€ 398.79
Additional sample set
€ 340.03
Additional cluster
€ 58.76
Details
Supported analytes
ASXL1 mutation |
BCOR mutation |
CBFB-MYH11 |
CEBPA bZIP mutation |
CEBPA dm |
EZH2 mutation |
FLT3 ITD |
FLT3 TKD |
GATA2 mutation |
IDH1 mutation |
IDH2 mutation |
KIT mutation |
NPM1 mutation |
RUNX1 mutation |
RUNX1-RUNX1T1 |
SF3B1 mutation |
SRSF2 mutation |
STAG2 mutation |
TP53 mutation |
U2AF1 mutation |
ZRSR2 mutation |
Methodelijst Mutatie screening en NGS bij hemat. maligniteit
ASXL1 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
BCOR mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
CBFB-MYH11 | Consensus methodegroep |
---|---|
PCR | Overall |
CEBPA bZIP mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
CEBPA dm | Consensus methodegroep |
---|---|
NGS | Overige methodes |
PCR | Overige methodes |
EZH2 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
FLT3 ITD | Consensus methodegroep |
---|---|
PCR | Overall |
FLT3 TKD | Consensus methodegroep |
---|---|
NGS | Overige methodes |
PCR | Overige methodes |
GATA2 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
IDH1 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
IDH2 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
KIT mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
NPM1 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
PCR | Overige methodes |
RUNX1 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
RUNX1-RUNX1T1 | Consensus methodegroep |
---|---|
PCR | Overall |
SF3B1 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
SRSF2 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
STAG2 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
TP53 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
U2AF1 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
ZRSR2 mutatie | Consensus methodegroep |
---|---|
NGS | Overige methodes |
Analyzer
Analyzer | Manufacturer |
---|---|
BioRad LightCycler | Bio-Rad |
GeneExpert | Cepheid |
Illumina HiSeq | Illumina |
Illumina MiSeq | Illumina |
Illumina NextSeq 2000 | Illumina |
Illumina NovaSeq | Illumina |
ABI Prism 7000 | Life Technologies |
ABI Prism 7500 | Life Technologies |
ABI Prism 7700 | Life Technologies |
ABI Prism 7900 | Life Technologies |
Overige | Overigen |
Rotor Gene | Qiagen |
Roche LightCycler 1.0 | Roche Diagnostics |
Roche LightCycler 1.2 | Roche Diagnostics |
Roche LightCycler 2.0 | Roche Diagnostics |
Roche LightCycler 480 | Roche Diagnostics |
Thermo Fisher Ion GeneStudio S5 | Thermo Fisher |
Thermo Fisher PGM | Thermo Fisher |
Thermo Fisher PGM Dx | Thermo Fisher |
Thermo Fisher Proton | Thermo Fisher |
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